urol-e5 / deep-dive

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Phys + ITS2 data matrices from deep dive samples #29

Closed JillAshey closed 1 year ago

JillAshey commented 1 year ago

@AHuffmyer could you pull the physiology and ITS2 data matrices for the individual deep dive samples and post them here? Thanks!

AHuffmyer commented 1 year ago

Where can I find a finalized list of the colonies from the E5 Moorea time series that are part of the deep dive?

hputnam commented 1 year ago

30-789513166_30-852430235_R3_SampleQC_Qubit.xlsx 30-789513166_30-852430235_R3_SampleQC_Tapestation_Gel.pdf

AHuffmyer commented 1 year ago

Phys matrix: https://github.com/urol-e5/timeseries/blob/master/time_series_analysis/Output/deep_dive_phys_matrix.csv ITS2 matrix (relative abundance): https://github.com/urol-e5/timeseries/blob/master/time_series_analysis/Output/deep_dive_ITS2_matrix.csv