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uw-ssec / phylo2vec

Phylo2Vec: a vector representation for binary trees
GNU Lesser General Public License v3.0
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chore: Design the Adapter architecture for bindings to Python and R #8

Open lsetiawan opened 1 month ago

lsetiawan commented 1 month ago

Overview

What does this interaction look like? How does one use phylo2vec in python or R? Current discussion maybe a phylo2vec object that contains the underlying ancestry matrix and various functions?

lsetiawan commented 2 weeks ago

A nice working usage of Phylogenetic tree: http://etetoolkit.org/docs/latest/tutorial/tutorial_phylogeny.html#visualization-of-phylogenetic-trees

lsetiawan commented 1 week ago

Current design can be found at https://drive.google.com/file/d/1AHojK5vZ9tgg-AbkSUlkWKyTjLXNOVC5/view