whitelist & cleanup - Githubissues

vanheeringen-lab / ANANSE

Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.

http://anansepy.readthedocs.io

MIT License

78 stars 16 forks source link

whitelist & cleanup #205

Closed siebrenf closed 1 year ago

siebrenf commented 1 year ago

ananse influence now accepts a whitelist of genes and/or interactions from the network

other stuff is mostly cosmetic:

docstrings updated
networkx function moved to its own module
ananse modules are now loaded in the API
linting applied: isort & black

codeclimate[bot] commented 1 year ago

Code Climate has analyzed commit 9db5559c and detected 0 issues on this pull request.

The test coverage on the diff in this pull request is 80.0% (50% is the threshold).

This pull request will bring the total coverage in the repository to 59.7% (0.4% change).

View more on Code Climate.