vatlab / varianttools

software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
https://vatlab.github.io/vat-docs/
GNU General Public License v3.0
31 stars 4 forks source link

Some typos in the vtools documentation #65

Closed BingLi17 closed 6 years ago

BingLi17 commented 6 years ago
  1. Tutorials->Quick start guide->3.Import an example data set:

ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/release/2010_07/exon/snps/CEU.exon.2010_03.sites.vcf.gz ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/release/2010_07/exon/snps/JPT.exon.2010_03.sites.vcf.gz

should be

http://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/release/2010_07/exon/snps/CEU.exon.2010_03.sites.vcf.gz http://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/release/2010_07/exon/snps/JPT.exon.2010_03.sites.vcf.gz

  1. Documentation->select->Examples: Select variants by variant info fields

% select variant 'pos < 200000' -t pos_20k 'variants with position < 20000'

should be

% vtools select variant 'pos < 200000' -t pos_20k 'variants with position < 20000'

BoPeng commented 6 years ago

Thanks. Please fix the sf.net doc and new doc because they are relatively easy to fix.

BingLi17 commented 6 years ago

Sure.