software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
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Some typos in the vtools documentation #65
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BingLi17 closed 6 years ago
ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/release/2010_07/exon/snps/CEU.exon.2010_03.sites.vcf.gz ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/release/2010_07/exon/snps/JPT.exon.2010_03.sites.vcf.gz
should be
http://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/release/2010_07/exon/snps/CEU.exon.2010_03.sites.vcf.gz http://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/release/2010_07/exon/snps/JPT.exon.2010_03.sites.vcf.gz
% select variant 'pos < 200000' -t pos_20k 'variants with position < 20000'
should be
% vtools select variant 'pos < 200000' -t pos_20k 'variants with position < 20000'