It doesn't work when I using the AlphaPeptDeep library to analyze my Dimethyl-labeled DIA data

vdemichev / DiaNN

DIA-NN - a universal automated software suite for DIA proteomics data analysis.

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It doesn't work when I using the AlphaPeptDeep library to analyze my Dimethyl-labeled DIA data #1094

Open ningzaizai opened 4 months ago

ningzaizai commented 4 months ago

Hi vdemichev, I predicted the dimethyl-labeled library with the AlphaPeptDeep and analyzed my Dimethyl-labeled DIA data using the predicted library on the DIANN-1.8.1. However, it just run one file and exited without any warning or error informations（read the screenshot bellow）. Can you help me?

Best

DIANN

vdemichev commented 4 months ago

Hi,

How much RAM is in the system? Most likely DIA-NN ran out of RAM. Also, please switch to DIA-NN 1.9.1.

Best, Vadim