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vmikk
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metagMisc
Miscellaneous functions for metagenomic analysis.
MIT License
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Strata argument from adonis2 can't be added
#33
AndreaVazgel
opened
2 weeks ago
1
dist2list, tri ==
#32
valugome
closed
3 weeks ago
2
Error in if (class(dis) %in% "phylo") { : the condition has length > 1
#31
chemy-cm
opened
5 months ago
1
how to install 0.0.4 version
#30
JH966
closed
5 months ago
1
phyloseq_filter_prevalence, non zero dimension
#29
JH966
closed
5 months ago
1
error in function phyloseq_filter_prevalence
#28
J5886
closed
5 months ago
14
Rewrite `prevalence` function using `data.table`
#27
vmikk
closed
11 months ago
1
Prevalence function missing from install
#26
LukDrey
closed
11 months ago
3
[adonis_pairwise function] Deprecation notice: Replace vegan::adonis with vegan::adonis2
#25
Ebedthan
closed
11 months ago
2
phyloseq_inext -- error in rbind
#24
gabriellestedman
opened
1 year ago
3
Error in validObject(.Object) : invalid class “otu_table” object: OTU abundance data must have non-zero dimensions.
#23
jvoneggers
closed
1 year ago
6
phyloseq_inext: merge fail
#22
JackDettoLoco
opened
1 year ago
1
Rewrite `get_max_taxonomic_rank` using `data.table`
#21
vmikk
opened
2 years ago
0
Average rarified OTU/ASV table after multiple rarefaction
#20
shreyaskumbhare
closed
2 years ago
3
Error in validObject(.Object) : invalid class “otu_table” object: OTU abundance data must have non-zero dimensions
#19
MonicaSteffi
closed
2 years ago
2
phyloseq_to_df error: Sample names
#18
otaviolovison
closed
2 years ago
4
phyloseq_filter_prevalence error
#17
lcamVz
closed
1 year ago
0
shared otus function problem
#16
pavlo888
closed
3 years ago
4
`dissimilarity_to_distance` - error if number of OTUs > number of samples
#15
vmikk
opened
3 years ago
0
Problem installing vmikk/metagMisc
#14
avportal
closed
4 years ago
5
phyloseq_mult_raref_avg: Perform rarefaction and average relative OTU abundance issue
#13
Salineraptor
closed
4 years ago
7
Error in dimnames(x) when trying to normalize OTU table in a phyloseq object
#12
sklasek
closed
4 years ago
2
Prevalence plots (total OTU abundance vs OTU prevalence)
#11
mariaasierra
closed
4 years ago
1
phyloseq_replace_zero and phyloseq_transform_aldex_clr
#10
javiercnav
closed
11 months ago
1
Implement robust alternative to SES
#9
vmikk
opened
4 years ago
0
Typos
#8
frederic-mahe
closed
4 years ago
1
information about phyloseq_mult_raref
#7
shashankx
closed
5 years ago
2
Logo proposal
#6
Batarian711
closed
5 years ago
2
Efficient rarefaction
#5
vmikk
opened
6 years ago
1
Purrr vs Plyr
#4
vmikk
opened
6 years ago
1
Tests needed
#3
vmikk
opened
6 years ago
0
MultSE and phyloseq filtering
#2
vmikk
closed
7 years ago
0
Parallelize plyr-dependent functions
#1
vmikk
opened
7 years ago
1