wasserth / TotalSegmentator

Tool for robust segmentation of >100 important anatomical structures in CT and MR images
Apache License 2.0
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What's the correct segmentation label match the organ name in Wholebody ct segmentation pre-trained model? #115

Closed ytl0623 closed 1 year ago

ytl0623 commented 1 year ago

Hi, I used to execute inference with TotalSegmentator high res. pre-trained model.

But after I finished the process the output image (.nii) is NOT match the organ list (like picture below).

The organ list (I supposed) is sort by A-Z, but the real output image is red text. image

So, what is the correct class label list with this model, and where can I find it?

Thanks!

wasserth commented 1 year ago

The correct label index list can be seen here: https://github.com/wasserth/TotalSegmentator#class-details