Open tony-res opened 10 months ago
I'd like to run docking on my own PDB files. What I don't understand is how to include the pdb of the antigen.
pdb
python process_data.py ${pdb_file} ${heavy_chain_id} ${antigen_chain_id}
Is the ${pdb_file} meant to be for the antibody, the antigen, or both?
${pdb_file}
How could I do it with one file called antigen.pdb and another called antibody.pdb?
antigen.pdb
antibody.pdb
I'd like to run docking on my own PDB files. What I don't understand is how to include the
pdbof the antigen.python process_data.py ${pdb_file} ${heavy_chain_id} ${antigen_chain_id}Is the
${pdb_file}meant to be for the antibody, the antigen, or both?How could I do it with one file called
antigen.pdband another calledantibody.pdb?