wiggins-lab / SuperSegger

A completely automated MATLAB-based trainable image cell segmentation, fluorescence quantification and analysis suite, particularly well suited for high-throughput time lapse fluorescence microscopy of in vivo bacterial cells.
GNU General Public License v3.0
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Consensus on SuperSeggerViewerGui #31

Open RoxaneMo opened 4 years ago

RoxaneMo commented 4 years ago

Hi,

Using the SuperSeggerViewerGui we are trying to make the consensus of all the cells from one image (snap shot).

But we have this error: _Computing consensus array (max cell number 83) Undefined function or variable 'ssCell'. Error in makeConsensusImage (line 69) towerMergeImages(dataImArray.imCell, dataImArray.maskCell, ssCell, ... Error in superSeggerViewerGui>consensus_image (line 1563) = makeConsensusImage(tmp,handles.CONST,tmpskip,4,0); Error in superSeggerViewerGui>output_list_Callback (line 1445) handles = consensus_image(handles) Error in gui_mainfcn (line 95) feval(varargin{:}); Error in superSeggerViewerGui (line 40) gui_mainfcn(guiState, varargin{:}); Error in

Do you know how we could solve the problem? The Cell Tower output option works.

Thank you.