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wwood / galah

More scalable dereplication for metagenome assembled genomes
GNU General Public License v3.0
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Fix skani shuffle #39

Closed AroneyS closed 11 months ago

AroneyS commented 12 months ago

I get this error on real-world use.

thread '<unnamed>' panicked at 'called `Option::unwrap()` on a `None` value', src/skani.rs:78:99
AroneyS commented 11 months ago

@wwood my real-world test works now. I spot-checked all the genomes from the weird cluster I found and they are all in individual clusters now.

wwood commented 11 months ago

Thanks. I guess now working out which index is which requires iteration of the whole array? Can you please make a hash lookup? Presumably fastera