wyp1125 / MCScanX

MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
http://chibba.pgml.uga.edu/mcscan2/
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Question regarding blast #43

Open Karimi-81 opened 3 years ago

Karimi-81 commented 3 years ago

Hi, thank you for developing MCScanX. I wonder if it is possible to use output of blastn instead of blastp for the analysis. I have a huge genome encountering many errors (memory and time) to perform balstp jobs. I tried to parallel the analyses but it was not efficient. Thanks