Repeated BAM tag field: `OX` - Githubissues

zaeleus / noodles

Bioinformatics I/O libraries in Rust

MIT License

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Repeated BAM tag field: `OX` #307

Closed wjwei-handsome closed 2 weeks ago

wjwei-handsome commented 2 weeks ago

Hi @zaeleus ,

Thanks for your awesome library.

As the title says, there is a duplication of tag in the code.

In detail:

https://github.com/zaeleus/noodles/blob/435325933818ddc6ad652c22f859bc3985913300/noodles-sam/src/alignment/record/data/field/tag.rs#L24-L25

https://github.com/zaeleus/noodles/blob/435325933818ddc6ad652c22f859bc3985913300/noodles-sam/src/alignment/record/data/field/tag.rs#L144-L145

ORIGINAL_UMI_BARCODE_SEQUENCE: OX ORIGINAL_UMI_QUALITY_SCORES: OX

Best regards, Wenjie

zaeleus commented 2 weeks ago

Thanks for reporting!