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zdk123
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SpiecEasi
Sparse InversE Covariance estimation for Ecological Association and Statistical Inference
GNU General Public License v3.0
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SpiecEAsi documentation
#223
Valentin-Bio-zz
closed
1 year ago
1
error installing via Rstudio
#222
spencerlong1
opened
2 years ago
1
Error using negative values from SpiecEasi with Fruchterman-Reingold layout
#221
paddyhooper
closed
1 year ago
1
How to change the output of SpiecEasi into a correlation matrix similar to the downloaded from MENAP ?
#220
YuZhang-learner
opened
2 years ago
5
Add latentcor
#219
zdk123
opened
2 years ago
0
Error installing on RStudio Cloud
#218
SarithaKodikara
closed
2 years ago
1
Error installing on macOS Monterey 12.5 Intel based
#217
LilEigenValue
opened
2 years ago
6
Query: Applying SpiecEasi network building method at genus or higher taxonomic level
#216
wasimbt
closed
2 years ago
4
Failed to install 'SpiecEasi' from GitHub
#215
Ruser111
closed
2 years ago
3
Compilation failed for package 'SpiecEasi'
#214
kdbchau
closed
2 years ago
2
arguments imply differing number of rows Error
#213
najouamghazli
opened
2 years ago
1
Got out-of-memory warnings while running
#212
HuoJnx
opened
2 years ago
2
Error in Installing SpiecEasi package
#211
DzungNguyen181
closed
2 years ago
2
Choice of method for heterogenous dataset and network analysis on a small number of ASVs/OTUs
#210
VivienPichon
opened
2 years ago
0
node size according to abundance count or degree frequency
#209
Joyce2896
closed
1 year ago
1
Cross-domain networks taxonomy/OTUid
#208
marcosigno93
closed
2 years ago
2
multi.spiec.easi function does not work.
#207
hiroakif93
opened
2 years ago
0
The igraph object does no contain layout graph attribute
#206
vibilia
closed
2 years ago
2
p value of weight coefficient
#205
danningwang
opened
2 years ago
0
Install failed
#204
dongyiyi
opened
2 years ago
0
still support older version of SpiecEasi?
#203
marwa38
closed
1 year ago
1
functional network analysis on picrust2 outputs?
#202
marwa38
closed
1 year ago
1
amgut2.filt.phy-type file generation
#201
yuanping-Zhou
opened
2 years ago
1
Suggest the `batch.pulsar` mode for Windows users when ncores>1
#200
Liuxiaoqiang1122
opened
2 years ago
2
map_levels issue using spieceasi and igraph
#199
RomGallet
closed
1 year ago
1
Obtaining Edge Weight Matrix in SLR Method
#198
erfanshekarriz
closed
2 years ago
4
Add mb method compatibility with huge v1.3.3 and lower
#197
kspeeriful
opened
2 years ago
5
Set a global default and user-overrides for the maxdf parameter in huge.mb
#196
kspeeriful
opened
2 years ago
7
Handle edge based on edge confidence
#195
flavien-maucourt
closed
2 years ago
3
How to correct correlation with sample size?
#194
wanglu2014
closed
2 years ago
2
Retrieving Edge Weights and Labelling Latent Variables with the SLR Method
#193
erfanshekarriz
closed
2 years ago
1
Number of nodes exceeds input dataset
#192
susheelbhanu
closed
2 years ago
6
Cann't install SpiecEasi
#191
JingjingChan
closed
1 year ago
2
whether it‘s suitable to solve the ‘Optimal lambda’ warning by bumping up ‘thresh’ value？
#190
Xuyifei-NAU
opened
3 years ago
1
Network at genus level
#189
380513
closed
3 years ago
2
Patch a few source code bugs
#188
zdk123
closed
3 years ago
0
Unable to install SpiecEasi on windows
#187
KellyKlomp
closed
3 years ago
2
Allow CLR-transformed data to be passed as inputs (e.g. for non-count data)
#186
ngs-seqer
opened
3 years ago
1
can not install it successfully
#185
shinepreventer
closed
3 years ago
1
Error compilation failed for package ‘SpiecEasi’
#184
vittoriofortino84
closed
3 years ago
1
Cannot compile SpiecEasi due to Armadillo error
#183
ZhikWang
closed
3 years ago
8
SPIEC-EASI with positive and negative edge colors # error
#182
alinawazfcc
opened
3 years ago
0
Can ALR be used in SpiecEasi?
#181
qunfengdong
opened
3 years ago
1
Interdomain network with low stability and NAs
#180
mibiost
opened
3 years ago
2
Get the SparCC p-values
#179
xphab
closed
3 years ago
0
Prey-Predator interaction
#178
ntromas
closed
3 years ago
6
segfault: linked to #73
#177
susheelbhanu
opened
3 years ago
9
Too many Edges! How to handle False Positives?!
#176
gilienv
closed
3 years ago
4
Add environmental metadata to network estimation
#175
jhardy910e
opened
3 years ago
2
Index out of bounds error
#174
nmarzz
closed
3 years ago
2
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