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0xTCG / biser

A fast tool for detecting and decomposing segmental duplications in genome assemblies
MIT License
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install BISER (Error) #3

Closed saraebell closed 2 years ago

saraebell commented 2 years ago

I am having issues with 'pip install git+https://github.com/0xTCG/biser.git' I believe I have successfully installed Seq programming language. I am unsure what the main issues is and where I can look to try and fix it. Any suggestions would be appreciated. Thank you in advance. Screen Shot 2022-03-01 at 9 28 09 AM Screen Shot 2022-03-01 at 9 31 44 AM

inumanag commented 2 years ago

Hi @saraebell,

Thank you for the report. Can you please tell me which OS / environment do you use?

saraebell commented 2 years ago

@inumanag Thank you for your response, yes, I am on a university HPC running CentOS 7.

Jingwen7 commented 2 years ago

Hi @inumanag ,

I have the same issue when installing BISER on HPC.

heyaoxi commented 2 years ago

Me too! Any solution?

inumanag commented 2 years ago

Apologies for the delay. Please try installing pre-compiled wheel by doing pip install biser. Let me know if this works.

inumanag commented 2 years ago

Closing the issue as this seems resolved.

saraebell commented 2 years ago

Thank you! Installing pre-compiled wheel with pip install biser appeared to solve the error and I have successfully installed biser.