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0xTCG / biser

A fast tool for detecting and decomposing segmental duplications in genome assemblies
MIT License
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elementary SDs and core SDs #31

Closed likui345 closed 1 year ago

likui345 commented 1 year ago

hi， What does CORE mean in the last column of the decomposition file? where can I find elementary SDs?

Thanks~

inumanag commented 1 year ago

Hi @likui345

Please see https://almob.biomedcentral.com/articles/10.1186/s13015-022-00210-2 for the difference between core and elementary SDs. Elementary SDs are availavle in output.elem.