10XGenomics / bamtofastq

Convert 10x BAM files to the original FASTQs compatible with 10x pipelines
MIT License
59 stars 6 forks source link

Bump rust-htslib from 0.40.2 to 0.41.1 #124

Closed dependabot[bot] closed 1 year ago

dependabot[bot] commented 1 year ago

Bumps rust-htslib from 0.40.2 to 0.41.1.

Release notes

Sourced from rust-htslib's releases.

rust-htslib: v0.41.0

0.41.0 (2023-03-02)

Features

  • Revised calculation of leading- and trailing-softclips (#375) (b61dd2c)
Changelog

Sourced from rust-htslib's changelog.

0.41.1 (2023-03-03)

Features

  • Revised calculation of leading- and trailing-softclips (#375) (b61dd2c)

Performance Improvements

  • update htslib and corresponding bindings to 1.16 (#366) (f597ce0)
Commits
  • e91b1e2 chore(master): release 0.41.1 (#380)
  • f1b1749 chore: use tarpaulin 0.22.0
  • f73f56d fix: move hts-sys into a separate repository
  • 48e0871 chore: do not pin tarpaulin version
  • 6f85e04 chore: clean up remainders of hts-sys in workspace
  • ed475af chore: fix machine declaration
  • a6e5add chore: cleanup cargo toml
  • 69377d5 chore: fix badge
  • 286fed2 chore: remove hts-sys as it has been migrated into separate repo rust-bio/hts...
  • 6eb744b Revert "chore(master): release rust-htslib 0.41.0 (#378)"
  • Additional commits viewable in compare view


Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)
adam-azarchs commented 1 year ago

@dependabot squash and merge