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10XGenomics / cellranger

10x Genomics Single Cell Analysis
https://www.10xgenomics.com/support/software/cell-ranger
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I have customized the length of the barcode and the length of the UMI #16

Closed cwt1 closed 4 years ago

cwt1 commented 5 years ago

I have customized the length of the barcode and the length of the UMI. How do I edit the script of cellranger count program to get the correct UMI count?

evolvedmicrobe commented 4 years ago

Hi @cwt1, the 10X reagents have fixed size barcodes and UMIs so you won't need to edit the scripts when they are used.