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10XGenomics / cellranger

10x Genomics Single Cell Analysis
https://www.10xgenomics.com/support/software/cell-ranger
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Using CellRanger for other UMI-based Single-Cell Platforms #223

Closed hkarakurt8742 closed 8 months ago

hkarakurt8742 commented 11 months ago

Hello, I am using CellRanger for the analysis of 10X Chromium based public datasets for a study but one of the studies are actually sequenced using Singleron GEXSCOPE and as I know this platform also uses UMI (I am not sure if it is full length transcript or 3' or 5' end). Is it possible to use such datasets with CellRanger?

Thank you in advance.

elehnert10x commented 8 months ago

Thank you for your interest in Cell Ranger. GitHub Issues are not monitored by our support team. Please e-mail support@10xgenomics.com for support with Cell Ranger or visit our documentation site at https://www.10xgenomics.com/support/software/cell-ranger.