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10XGenomics / cellranger

10x Genomics Single Cell Analysis
https://www.10xgenomics.com/support/software/cell-ranger
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'Found 0 or >1 features for confidently mapped read/pair #67

Closed shaaaarpy closed 4 years ago

shaaaarpy commented 4 years ago

Hi i got this issue for my public data. image can you please tell what the issue is?

evolvedmicrobe commented 4 years ago

Hi @shaaaarpy, That error was produced at this line of code: https://github.com/10XGenomics/cellranger/blob/5f5a6293bbc067e1965e50f0277286914b96c908/lib/rust/cr_stage/src/cmd_mark_dups.rs#L291 I'd reach out to support@10xgenomics.com for further follow up, it can indicate the input files are corrupted or some other problem they'll be well equipped to address.