Closed WellJoea closed 4 years ago
The best source for batch effect documentation is the support pages here: https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/using/aggregate, and please feel free to reach out to support@10xgenomics.com if you encounter other issues.
Warm wishes, Nigel
Hi, Dear Prof. I want to know whether the the matrix of filtered_feature_bc_matrix files in aggr have been corrected by batch effect as I removed batch effect in the command of "cellranger aggr" by setting "batch" in --csv file
Thanks!