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10XGenomics / vartrix

Single-Cell Genotyping Tool
MIT License
185 stars 27 forks source link

the problem of Installation #34

Closed crystal0721 closed 4 years ago

crystal0721 commented 4 years ago

Dear, When we install vartix，we got the error：

error: failed to run custom build command for rust-htslib v0.24.0

Caused by: process didn't exit successfully: /vartrix/vartrix-master/target/release/build/rust-htslib-c795693bb4b33ad2/build-script-build (exit code: 101)

We can not build rust-htslib v0.24.0 successfully， would you help me？ We had install rust successfuly and our CentOS is v6.6.

pmarks commented 4 years ago

If you just want to use the tool, please use the pre-built Linux binary: https://github.com/10XGenomics/vartrix/releases/download/v1.1.8/vartrix_linux It should work on CentOS 6.6.

To build from source, you need the following packages installed: llvm-dev libclang-dev clang (these are the Debian package names, there might be different names for CentOS) Please run with cargo build -v to get more detailed error messages. My guess is that you need to install these libraries.

I updated the build instructions to mention this requirement.