Release v3.3.0

[steven-murray]

Internals

• Refactored setting up of inputs to high-level functions so that there is less code repetition.

Fixed

• Running with R_BUBBLE_MAX too large auto-fixes it to be BOX_LEN (#112)
• Bug in calling clear_cache.
• Inconsistency in the way that the very highest redshift of an evolution is handled between low-level code (eg. spin_temperature()) and high-level code (eg. run_coeval()).

Added

• New validate_all_inputs function that cross-references the four main input structs and ensures all the parameters make sense together. Mostly for internal use.
• Ability to save/read directly from an open HDF5 File (#170)
• An implementation of cloud-in-cell to more accurately redistribute the perturbed mass across all neighbouring cells instead of the previous nearest cell approach
• Changed PhotonConsEndCalibz from z = 5 -> z = 3.5 to handle later reionisation scenarios in line with current observations (#305)
• Add in an initialisation check for the photon conservation to address some issues arising for early EOR histories (#311)
• Added NON_CUBIC_FACTOR to UserParams to allow for non-cubic coeval boxes (#289)

[codecov[bot]]

Codecov Report

Patch coverage: 93.65% and project coverage change: +0.27 :tada:

Comparison is base (e271292) 86.33% compared to head (847f43d) 86.60%.

Additional details and impacted files

```diff @@ Coverage Diff @@ ## production #327 +/- ## ============================================== + Coverage 86.33% 86.60% +0.27% ============================================== Files 12 12 Lines 2780 2814 +34 ============================================== + Hits 2400 2437 +37 + Misses 380 377 -3 ``` | [Impacted Files](https://app.codecov.io/gh/21cmfast/21cmFAST/pull/327?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=21cmfast) | Coverage Δ | | |---|---|---| | [src/py21cmfast/\_cfg.py](https://app.codecov.io/gh/21cmfast/21cmFAST/pull/327?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=21cmfast#diff-c3JjL3B5MjFjbWZhc3QvX2NmZy5weQ==) | `96.87% <ø> (ø)` | | | [src/py21cmfast/inputs.py](https://app.codecov.io/gh/21cmfast/21cmFAST/pull/327?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=21cmfast#diff-c3JjL3B5MjFjbWZhc3QvaW5wdXRzLnB5) | `91.62% <87.75%> (+1.73%)` | :arrow_up: | | [src/py21cmfast/wrapper.py](https://app.codecov.io/gh/21cmfast/21cmFAST/pull/327?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=21cmfast#diff-c3JjL3B5MjFjbWZhc3Qvd3JhcHBlci5weQ==) | `88.77% <94.23%> (-0.24%)` | :arrow_down: | | [src/py21cmfast/\_utils.py](https://app.codecov.io/gh/21cmfast/21cmFAST/pull/327?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=21cmfast#diff-c3JjL3B5MjFjbWZhc3QvX3V0aWxzLnB5) | `88.90% <95.00%> (+0.82%)` | :arrow_up: | | [src/py21cmfast/cache\_tools.py](https://app.codecov.io/gh/21cmfast/21cmFAST/pull/327?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=21cmfast#diff-c3JjL3B5MjFjbWZhc3QvY2FjaGVfdG9vbHMucHk=) | `96.72% <100.00%> (-1.59%)` | :arrow_down: | | [src/py21cmfast/outputs.py](https://app.codecov.io/gh/21cmfast/21cmFAST/pull/327?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=21cmfast#diff-c3JjL3B5MjFjbWZhc3Qvb3V0cHV0cy5weQ==) | `92.12% <100.00%> (-0.02%)` | :arrow_down: |

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