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3D-Beacons
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3d-beacons-client
Implementation of the 3D-Beacons client (local 3D model server)
Apache License 2.0
3
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Docker app won't build - Dependency Versions not specified in Requirements.txt files
#48
kcaj21
opened
3 weeks ago
0
Support UniProt accessions with "submittedName"
#47
huiwenke
closed
1 year ago
0
Added fix to use only .json files for mongo load
#46
sreenathnair
closed
1 year ago
0
Breaking: Updated to v2
#45
sreenathnair
closed
1 year ago
0
Create LICENSE
#44
mvaradi
closed
1 year ago
0
add alphafold metadata generator
#43
sillitoe
opened
2 years ago
0
Add loader (automatic metadata generator) for alpha-fold PDB files
#42
iandaaci
opened
2 years ago
0
GH040: add confidence score
#41
sillitoe
closed
2 years ago
0
Add confidence type + score to meta data
#40
iandaaci
closed
2 years ago
0
Add local search facilities
#39
sillitoe
opened
2 years ago
1
run docker container with unprivileged user
#38
sillitoe
opened
2 years ago
0
Gh036: update schema
#37
sillitoe
closed
2 years ago
1
update to latest version of 3d-beacons schema
#36
sillitoe
opened
2 years ago
0
GH033: fix static links
#35
sillitoe
closed
2 years ago
0
Minor README improvements
#34
sbliven
closed
2 years ago
0
Static files not served as expected
#33
sbliven
closed
2 years ago
2
Add local endpoint for individual structures
#32
sillitoe
opened
2 years ago
0
PDB to mmCIF converted files do not validate for the PDBx/mmCIF dictionary
#31
bienchen
opened
2 years ago
0
Fix #28: escape special characters in mongo credentials
#30
sbliven
closed
2 years ago
1
Connect an example deployment to Hub
#29
iandaaci
opened
2 years ago
0
Reserved characters error running snakemake
#28
sbliven
closed
2 years ago
3
uniprot_model, created: the regexp did not enforce a correct date; pydantic handles date types
#27
hegelab
closed
2 years ago
0
GH025: add AlphaFold model
#26
sillitoe
closed
2 years ago
0
Error when trying to convert AFDB model .pdb & .json for indexing
#25
mvaradi
closed
2 years ago
3
correct file names and module names
#24
lazartomi
closed
2 years ago
1
Suggested changes to development (before merging to master)
#23
sillitoe
closed
2 years ago
0
Bump babel from 2.8.0 to 2.9.1
#22
dependabot[bot]
closed
2 years ago
0
Code review: overview
#21
sillitoe
closed
2 years ago
2
Bump flask-restx from 0.4.0 to 0.5.1
#20
dependabot[bot]
closed
2 years ago
1
Bump flask-restx from 0.4.0 to 0.5.1
#19
dependabot[bot]
closed
2 years ago
0
QMEAN API error: "No valid residues could be found in structure"
#18
sillitoe
closed
2 years ago
1
Get QMEAN docker instance working locally
#17
sillitoe
opened
3 years ago
1
Bump pyyaml from 5.3.1 to 5.4
#16
dependabot[bot]
closed
3 years ago
1
Bump py from 1.8.1 to 1.10.0
#15
dependabot[bot]
closed
3 years ago
1
Bump pygments from 2.5.2 to 2.7.4
#14
dependabot[bot]
closed
3 years ago
1
Bump jinja2 from 2.11.2 to 2.11.3
#13
dependabot[bot]
closed
3 years ago
1
Bump urllib3 from 1.25.9 to 1.26.5
#12
dependabot[bot]
closed
3 years ago
1
Bump py from 1.8.1 to 1.10.0
#11
dependabot[bot]
closed
3 years ago
0
Bump pygments from 2.5.2 to 2.7.4
#10
dependabot[bot]
closed
3 years ago
0
Bump pyyaml from 5.3.1 to 5.4
#9
dependabot[bot]
closed
3 years ago
0
Bump jinja2 from 2.11.2 to 2.11.3
#8
dependabot[bot]
closed
3 years ago
0
Bump bleach from 3.1.4 to 3.3.0
#7
dependabot[bot]
closed
3 years ago
0
Collate curated dataset to use for tests (identifiers / models)
#6
sillitoe
opened
3 years ago
0
Trim python dependencies
#5
sillitoe
opened
3 years ago
0
Add documentation for new developers
#4
sillitoe
opened
3 years ago
0
Add tests to check the API works as expected
#3
sillitoe
opened
4 years ago
0
Bump bleach from 3.1.1 to 3.1.4
#2
dependabot[bot]
closed
3 years ago
0
add extra dependencies for clean install
#1
nsneeladrisen
closed
4 years ago
0