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3D-e-Chem / knime-sstea

Knime node to calculate ss-TEA score of sequence alignment and subfamily members.
Apache License 2.0
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Toggle to ignore gaps #8

Open sverhoeven opened 8 years ago

sverhoeven commented 8 years ago

Now gaps (-) are treated as amino acids. The Knime node should have a checkbox in the configure dialog to ignore the gaps.

sverhoeven commented 8 years ago

Characters like '?' or ' ' should also be ignored besides '-'.

sverhoeven commented 7 years ago

Ignoring the gaps would make comparing different positions impossible due to alignment not being rectangular anymore.

We need to correct for the ignored gaps somehow.