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3D-e-Chem / knime-sygma

KNIME nodes for Sygma
GNU General Public License v3.0
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Add SyGMa node to 3d-eChem-VM #10

Closed ridderl closed 7 years ago

ridderl commented 7 years ago

After a fresh install of the VM I don't have the SyGMa node.

sverhoeven commented 7 years ago

Can you check which version of the 3D-e-Chem vagrant base box you have with vagrant box list?

It should return something like:

nlesc/3d-e-chem                     (virtualbox, 1.2.1)

Your version is probably lower. Please follow the instructions at https://github.com/3D-e-Chem/3D-e-Chem-VM/wiki/Software#upgrading to either recreate the VM based on the latest box or upgrade the VM.

sverhoeven commented 7 years ago

SyGMA was added in version 1.2.0 of the 3D-e-Chem vagrant base box.

ridderl commented 7 years ago

Ah, for some reason I'm still on nlesc/3d-e-chem (virtualbox, 1.1.1). I'm now trying vagrant box update --box nlesc/3d-e-chem

ridderl commented 7 years ago

Should the vagrant box update --box nlesc/3d-e-chem command also be mentioned in the paper? I think with the init command you just get 1.1.1 ?

sverhoeven commented 7 years ago

The first time vagrant up is run after a vagrant init nlesc/3d-e-chem, vagrant will download the latest 3d-e-chem box at that time. Any vagrant VMs created later will use that box. So if you had deleted the box before doing a vagrant up you should have gotten the v1.2.1 version.

I think it will make the paper go into too much technical detail, giving multiple ways to accomplish an update. Also if the web server was up, the vagrant_upgrade command would have worked OK. So what is in the paper is correct, but just not comprehensive.

ridderl commented 7 years ago

Agreed, thanks for clarifying.