Closed rysterzhu closed 5 years ago
csd=read_and_prepare(paste0(wdir,"/",sample,"-chr7.tsv"), paste0(wdir,"/",sample,"-chr7.RData"), sample, "1", enzyme="MboI", name=sample, dangling.L=c(0),circularize=-1, dangling.R=c(3), maxlen=800, read.len=100, dmin=1000, save.data=T)
*** BIASES AND COUNTS Sum up counts and biases Reattribute biases to proper rsites Add Rsite info Produce bias list Error in dcast.data.table(enrich[id1 == id2 & category %in% c("dangling.L", : Can not cast an empty data.table
csd=read_and_prepare(paste0(wdir,"/",sample,"-chr7.tsv"), paste0(wdir,"/",sample,"-chr7.RData"), sample, "1", enzyme="MboI", name=sample, dangling.L=c(0),circularize=-1, dangling.R=c(3), maxlen=800, read.len=100, dmin=1000, save.data=T)
*** BIASES AND COUNTS Sum up counts and biases Reattribute biases to proper rsites Add Rsite info Produce bias list Error in dcast.data.table(enrich[id1 == id2 & category %in% c("dangling.L", : Can not cast an empty data.table