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3UTR / DaPars2

Dynamics analysis of Alternative PolyAdenylation from RNA-seq
GNU General Public License v2.0
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Error: No gene bed file!", file=sys.stderr #15

Closed FilipaMendonca closed 2 years ago

FilipaMendonca commented 2 years ago

Hello! I'm trying to generate region annotation using DaPars_Extract_Anno.py, and I am getting the following error:

python DaPars_Extract_Anno.py -b hg38_refseq_whole_gene.bed -s hg38_Refseq_id_from_UCSC.txt -o hg38_refseq_extracted_3UTR.bed

File "DaPars_Extract_Anno.py", line 128 print("Error: No gene bed file!", file=sys.stderr)

Can you please tell me why is this happening? Best regards, Filipa Lopes de Mendonça