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3dem / model-angelo

Automatic atomic model building program for cryo-EM maps
MIT License
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ModelAngelo failed with ValueError #28

Closed lipan6461188 closed 1 year ago

lipan6461188 commented 1 year ago

I run the following command and failed.

model_angelo build -v 7o6q.mrc -f 7o6q.fasta -o 7o6q

Data: https://drive.google.com/drive/folders/172nIVa9Upw5kJLkK6ABXEkxYwVLEHHgA?usp=share_link Log: model_angelo.log

jamaliki commented 1 year ago

Hi!

Sorry, we have not yet done vigorous input checking. The map is too small. It needs to be at least 64 * 1.5 = 96 angstrom in each direction but this map has a dimension that is 71.613 angstrom. Could you pad your map to 200 pixels each side?

This will soon be done automatically.

Best, Kiarash.

lipan6461188 commented 1 year ago

Thanks, it solved my problem!