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3dem / relion

Image-processing software for cryo-electron microscopy
https://relion.readthedocs.io/en/latest/
GNU General Public License v2.0
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Error in textToInteger in subset selection in relion 3.1.3 #795

Closed heejongkim closed 3 years ago

heejongkim commented 3 years ago

RELION 3.1.3 specific issue with subset selection. Once I hit "Display!" in Relion display GUI pop up from subset selection job, it emits the follow error msg. From the exact same session and same classification job, 3.1.2 has no issue to display the classes to choose.

in: /data/Users/spuser/relion-3.1.3/src/strings.cpp, line 232
ERROR: 
Error in textToInteger
=== Backtrace  ===
relion_display(_ZN11RelionErrorC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES7_l+0x66) [0x43dad6]
relion_display(_Z13textToIntegerPKciNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0xbb) [0x45905b]
relion_display(_Z13textToIntegerRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS4_+0x36) [0x573716]
relion_display(_ZN9Displayer4readEiPPc+0x169a) [0x55931a]
relion_display(main+0x27) [0x433e17]
/lib64/libc.so.6(__libc_start_main+0xf5) [0x2aaaba5a83d5]
relion_display() [0x436b6f]
==================
ERROR: 
Error in textToInteger
biochem-fan commented 3 years ago

What happens if you delete .relion_display_gui_settings and .gui_*?

heejongkim commented 3 years ago

Wow. Great! It got fixed. It's showing the classes now. Thank you for your help.

best, heejong