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3dem / relion

Image-processing software for cryo-electron microscopy
https://relion.readthedocs.io/en/latest/
GNU General Public License v2.0
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How to use relion in a system without graphical desktop? #866

Closed ghost closed 2 years ago

ghost commented 2 years ago

How to use relion in a system without graphical desktop? I couldn't find something useful in tutorial.

biochem-fan commented 2 years ago

Do you mean running RELION on a cluster node without X11? Note that you can usually run GUI via SSH X11 forwarding.

If the node does not have necessary headers, RELION can be compiled without GUI by cmake -DGUI=OFF. In this case you should run GUI on another machine with X and then submit a job to the head-less node.