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4dn-dcic / hic2cool

Lightweight converter between hic and cool contact matrices.
MIT License
66 stars 7 forks source link

Installing hic2cool doesn't install executable #7

Closed pkerpedjiev closed 7 years ago

pkerpedjiev commented 7 years ago

hic2cool is successfully installed using pip:

[peter@mbi-cw-l10381 Forcato-et-al-2017]$ pip install hic2cool
Collecting hic2cool
  Downloading hic2cool-0.3.5.tar.gz
Requirement already satisfied: h5py>=2.5.0 in /Users/peter/miniconda3/envs/cenv3/lib/python3.6/site-packages (from hic2cool)
Requirement already satisfied: numpy>=1.10.1 in /Users/peter/miniconda3/envs/cenv3/lib/python3.6/site-packages (from hic2cool)
Requirement already satisfied: six in /Users/peter/miniconda3/envs/cenv3/lib/python3.6/site-packages (from h5py>=2.5.0->hic2cool)
Building wheels for collected packages: hic2cool
  Running setup.py bdist_wheel for hic2cool ... done
  Stored in directory: /Users/peter/Library/Caches/pip/wheels/0b/27/e7/a8e78b33ac862af36a385c7cfc8fe615ca5ddb36412d0b5d25
Successfully built hic2cool
Installing collected packages: hic2cool
Successfully installed hic2cool-0.3.5

But when I try to run it from the command line, it says that hic2cool is not found:

[peter@mbi-cw-l10381 Forcato-et-al-2017]$ hic2cool
-bash: hic2cool: command not found

This is using conda and python3.

carlvitzthum commented 7 years ago

Fixed as of version 0.3.6.