Specifying ECR AWSF_IMAGE in snakemake

4dn-dcic / tibanna

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

MIT License

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Specifying ECR AWSF_IMAGE in snakemake #347

Closed klai5 closed 3 years ago

klai5 commented 3 years ago

Hello,

When I am running tibanna with snakemake I am getting the following error:

Error response from daemon: toomanyrequests: You have reached your pull rate limit. You may increase the limit by authenticating and upgrading: https://www.docker.com/increase-rate-limit

Is there a way to specify an ECR image of 4dndcic/tibanna-awsf & snakemake/snakemake:latest when using tibanna + snakemake?

Thanks!

klai5 commented 3 years ago

Nevermind. Thanks for adding the awsf_image config parameter!