Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.
I am getting
SyntaxWarnings
at various places when using Python 3.12, e.g.,This is exptected with Python 3.12: https://docs.python.org/dev/whatsnew/3.12.html#other-language-changes I think we need to use raw strings instead.