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**What happened?**
Hello,
I encountered multiple warnings while preparing the preprocessing pipeline using the Halfpipe container. The warnings indicate that Halfpipe could not parse several fMRI…
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hi i'm using the CAM-CAN dataset preproc_fMRI_realignunwarp volumes (fMRI volumes realigned and unwarped from Fieldmaps). Since these volumes are already motion realigned, I wonder if its possible to …
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Dear Lars
I’m writing as I have problems using the Physio Toolbox with our cortico-spinal data. We acquired brain and spinal cord fMRI data simultaneously (Finsterbusch 2013). I tried to solve it b…
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The code is simple :
```
sd = fetch_spm_multimodal_fmri()
sd.output_dir = "/tmp/sub001"
sd.func = [sd.func1, sd.func2]
do_subject_preproc(sd.__dict__, concat=False, coregister=True, stc=True,
…
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### Title
fMRI-EEG Preprocessing QA
### Leaders
@s_goodale23 - Sarah Goodale
### Collaborators
_No response_
### Brainhack Global 2023 Event
BrainHack Vanderbilt
### Project D…
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Does anyone know what AFNI BIDS derivatives look like?
tsalo updated
2 weeks ago
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Hi,
I tried to run the "download_abide_preproc.py" script to download ABIDE preprocessed data from S3, but met the following error:
urllib.error.URLError:
I am wondering if the given url is sti…
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Hi,
I would like to create physiological regressors using a script but it keep crashing with the following message:
`error: Item matlabbatch: No repeat named physio`
The same batch works fine in…
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I preprocessed my data using fmriprep. I'd like to use the data that's transformed to the MNI Asymmetric template and been denoised with AROMA (e.g., *bold_space-MNI152NLin2009cAsym_variant-smoothAROM…
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While adopting BIDS in CMP3, the way CMP is working changed dramastically and this feature, available in previous versions, is not working anymore for the moment.
However, this is an important featu…