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fwer wercwetrwt wtwcwerwetc wtwcwetcwfwer wercwetrwt wtwcwerwetc wtwcwetcwfwer wercwetrwt wtwcwerwetc wtwcwetcwfwer wercwetrwt wtwcwerwetc wtwcwetcwfwer wercwetrwt wtwcwerwetc wtwcwetcw
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### Description
HI. Thank you for your wonderful workong! I was wondering if there are any plans to implement FDR correction in the future? FDR correction is more commonly used and popular compared t…
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We introduce rescaled Zreps using the kappas, gammas:
https://github.com/ras44/gcp_jupyterlab_001/blob/acd216caaa6da2d865c05b874943630abc3c1f7d/mac_run.py#L62-L63
And we calculate the FWER based…
ras44 updated
4 years ago
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Currently `Brain_Data.randomise` has a naive implementation that's a bit slow and requires manually thresholding results afterwards. FSL's randomise on the other hand automatically computes TFCE maps …
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Hi. @songxiaoyu
Here is a summary of my xList and yList.
```
yList = list(rna, protein); xList = list(cnv)
## cnv: A data frame with 18 genes and 119 variables. The variables included geneSymbol…
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Is there a way to define and reuse filepaths?
## Scenario
1. I have a _long_ glob of file names I want to **include** for formatting.
2. I also have a _long_ glob of file names I want to **excl…
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Hi. @songxiaoyu @JiayiJi
I've run the iProFun.detection with the NoProbButFWERIndex = NULL and the length of xList of 1. But it returned an error as follows.
```
res
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See:
1. https://stats.stackexchange.com/questions/166510/controlling-fwer-using-minp-maxt-methods, report both permutation pvalue and corrected permutaton p-value
2. https://mne.tools/stable/gener…
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We initially planned to re-use STATO terms for:
- p-value
- FWE-corrected p-value
- FDR p-value
But looking more closely at STATO (OBI), those terms are defined as classes while we use them as prope…
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The p-values are not uniformly distributed under the Null when the sample space is discrete as in Binomial with small counts.
Bonferroni, Holm and Hochberg can be improved by taking the actual dist…