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* **What is the current behavior?**
Following the tutorial using BrainStat in a Jupyter Notebook running through Singularity. In the tutorial, you are supposed to be able to fetch gene expression usi…
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Modify the function save_gifti in io.py to avoid having empty metadata.
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Dear Darren,
unfortunately the most recent version of mni2fs does not work for me. When trying to run it (e.g. run_example.m), I get the following error:
```
Error using read_gifti_file_standa…
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Hello @yetianmed,
Thank you for making this atlas available in volumetric space and in cifti format. I believe in order to extract freesurfer data, I need the surface files to be in .annot format, …
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Hi there,
Many thanks for developing this awesome tool. I hope to use this tool to temporal filter my cifti fMRI data, but I found it cannot find the module 'nibabel.gifti.giftiio'. I checked the A…
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Currently, the pipeline will operate within the volumetric sphere. The interface for MRI data is largely volumetric. I will add options to recognize CIFTIs and integrate within the pipeline.
This …
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Nistats may provide realtively easily gifti and cifti support.
As a first setp, we can provide an example showing how to process cifti-sampled fMRI data.
In the longer term, if needed, we can c…
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Hi all! Thanks for the awesome toolbox! I am currently tying to export vertex data as a GIfTI and am wondering if there is any easy way to do with within your toolbox.
I am able to generate Vertex…
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Moved from https://github.com/niivue/niivue-vscode/issues/68
Here is an example scan from pynrrd: https://github.com/mhe/pynrrd/blob/master/nrrd/tests/data/test2d_ascii.nrrd
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Bug report from @MichielCottaar (via PR):
> The problem is that the submodules are not imported automatically, so for example there is a gifti submodule containing GiftiImage. However if I add "gifti…