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**Describe the bug**
non-existent flowAcc data
**To Reproduce**
run bfModel notebook udpated
**Expected behavior**
vtk output
**Desktop (please complete the following information):**
- O…
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I am trying to upload an hdf5 file using napari-itk-io but I am getting the following error message:
I have tried installing the plugin using both pip and conda install, but I still get the "ther…
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I'm getting a KeyError Traceback for several different HDF5 files.
For example, trying to use this test file from kerchunk:
https://github.com/fsspec/kerchunk/blob/ae692fead51a216691e4db9a67c9919…
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Dear Jerome and all,
as you are certainly aware of, lima2 can handle more than one images taken with more than one threshold.
At id10, we have already one Eiger2 4M running with Lima2
When I tri…
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It seems good to use hdf5 to store measurement data (instead of json).
Pymodaq offers a package to store and visualize such a file: https://github.com/PyMoDAQ/pydatamanager
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Hello!
In read_hdf5(), the default option is that the data is read **tranposed and upside-down**.
This is probably not what you always want.
It would be nice to have a switch to decided whether…
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Hello,
I am trying to compile.
I have compiled fesapi dev branc with it's own hdf5 dependency
I have compiled paraview with
`cmake -GNinja -DCMAKE_BUILD_TYPE=Release -DPARAVIEW_QT_VERSION=5 -DV…
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E.g. NMR hdf5 data is corrupted, catch Hdf5 files. Possibly lazily open hdf5 files as writeable only when needed?
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I propose adding the functionality to save the charge density information in a HDF5 format, which is already mentioned in #3.
This issue should serve as the main discussion point for the implementa…
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Currently, we have custom save_dtype export for numpy dtypes, to avoid having to fall back to the pickle protocol (for which we issue a warning).
Numpy keeps making that harder and harder for us, by …