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# Implement HRA version of HuBMAP shared navigation component
- Design menu options to pitch tomorrow at CNS UX specs
- Redesign every app header to feature this button with shared nav functionality…
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Get cells for an unregistered dataset on HuBMAP Portal, then use https://apps.humanatlas.io/api/#post-/hra-pop/cell-summary-report to predict a goodie bag of spatial origins.
Background:
- Cells …
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This will utilize the Harvard Search API code to query the rule chain from Ingest API: https://github.com/hubmapconsortium/search-api/blob/ee099bfb8836dd59cf56b6c18d0bafba8b717ff9/src/hubmap_translati…
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Consider a dicrionary to map Hubmap data model to HTAN
https://view.officeapps.live.com/op/view.aspx?src=https%3A%2F%2Fhubmapconsortium.github.io%2Fingest-validation-tools%2Ffield-schemas.xlsx&wdOr…
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# Statement of problem
Data are often associated with organs at a high level of specificity--e.g., with the left lung. It should be possible to organize data by organ hierarchically. In addition, the…
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# Dependency
UBKG dataset type codes are cross-referenced to HRAVS concepts. A new dataset type should be added to HRAVS.
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@bherr2
The fig. below shows as-cell-summaries for two AS in the female heart, annotated with Azimuth:
The datasets contributing to these are here:
https://github.com/x-atlas-consortia/hra-pop…
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Globusconnectpersonal on windows/mac/linux has settings to give permissions for different directories but we still haven't seemed to find how to get gcp to let us set a location outside of the home di…
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See also #2035
To best serve hubmap we should collect prospectively what *kinds* of terms are likely to be needed in short/medium/long term frames
I don't anticipate adding new terms that alrea…
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