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When installing clij3 along with the new imglib2 jar, it break bigdataview with the following error. Not related to clij3 it self but put it here as a warning until fix is done.
```java
Exception …
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I made a simple program to try out the marching cubes algorithm.
ImgOpener imgOpener = new ImgOpener();
Img img = (Img) imgOpener.openImgs(
new File(args[0]).getAb…
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Hello!
I'm trying to follow the [ImgLib2 Examples](https://imagej.net/ImgLib2_Examples) to open a TIFF hyperstack that was generated with ImageJ. If I follow Example 1a, which uses ImageJ to open t…
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We want to add JPMS module descriptors to the core ImgLib2 artefacts. This issue tracks overall progress on this.
## Which repos should be included in this effort?
Which repos should become imgl…
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[`N5ImageLoader`](https://github.com/bigdataviewer/bigdataviewer-core/blob/master/src/main/java/bdv/img/n5/N5ImageLoader.java) should be able to initialize SetupImgLoaders lazily.
The reason that t…
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In Fiji I have a minimal script. I just want to threshold an 8-bit image:
```groovy
#@ OpEnvironment ops
#@ ImgPlus img
thresh = ops.op("threshold.mean").input(img).apply()
```
This produc…
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Hello ijp-kheops team! I'm helping out a team close to me with slide digitization, I'm trying to incorporate this library into a script and workflow. I'm starting with a sequence of tiff images that h…
ohkio updated
4 months ago
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Hey yxdragon,
ImagePy looks great. I don't know if you're aware of [imglib2-imglyb](https://github.com/hanslovsky/imglib2-imglyb), but that is a native bridge between existing JVM-based ImageJ and …
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- [ ] Set `net.imglib2.ij`.
- [ ] Move all classes under the `net.imglib2.ij` package.
- [ ] #38
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@ctrueden provided me with a script that can be run in Fiji-future with a SNAPSHOT `scijava/scripting-python` jar, which does the following:
* Initializes a multi-channel `Dataset`.
* Converts it to…