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Hi all. I am currently a Google Summer of Code Scholar working with MDAnalysis. My project involves the creation of a converter to convert between OpenBabel OBMols and MDAnalysis Universes. I am worki…
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Tests for all windows are failing because MDAnalysis is not being installed.
Example: https://github.com/Becksteinlab/basicrta/actions/runs/11904145945/job/33172432713
```
Run mamba install -y …
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## Is your feature request related to a problem? ##
Initially, I was going to work on the https://github.com/MDAnalysis/mdanalysis/issues/3925 issue, and I was looking at psa.py. I noticed there wa…
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Hi all,
I have a question/request regarding selections in Molecular Nodes. We recently published a [MDAKit](https://github.com/BioMemPhys-FAU/domhmm) to identify domains in membranes. I think it wo…
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We are getting the below errors when building the docs. @Ragzouken you said some docstrings might need fixing?
```
WARNING: Failed to import nanover.ase.omm_calculator.
Possible hints:
* ModuleN…
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I checked [MDAnalysis User Guide - Stable Index](https://userguide.mdanalysis.org/stable/index.html) and found several links that are either broken, lead to 404 errors, or are inaccessible. Below is a…
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Currently [`MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel`](https://github.com/MDAnalysis/mdanalysis/blob/develop/package/MDAnalysis/analysis/hydrogenbonds/hbond_autocorrel.py) does lack an imple…
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I checked [MDAnalysis Main Website](https://www.mdanalysis.org/) and found several links that are either broken, lead to 404 errors, or are inaccessible -
| **#** | **Error** | **Anchor Te…
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'MDAnalysis.topology.TPRParser.TPRParser'>. Error: Your tpx version is 134, which this parser does not support, yet [Fri Nov 8 12:24:14 2024]
got this while running equil_run_complex_get_boresch_re…
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Potential extra options to enable when streaming a trajectory from disk:
- [x] Offset the start frame of the trajectory (currently locked to start frame 0) #608
- [ ] Enable wrapping methods suc…