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@wxy-nlp I can not find pdb file [os.path.join('data-bin/scaffolding-pdbs/' + pdb + '_motif.pdb') ] when run scaffold_generate.py, Can you provide it?(https://github.com/microsoft/evodiff/tree/ma…
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## Background
In NGB, we can search for a specific nucleotide sequence in different references using BLAST.
But BLAST is complicated to deploy/configure and takes a lot of time to process a reques…
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Write an iterative method that will start by looking for enrichments and deficiencies for each location and each amino acid. Then it will
- select the significant subset using a given threshold
- fo…
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When annotating site sequence context for motif search, sequences are assumed to have length 31 (+-15), and 20 residues are cut away to make them length 11 (+-5). This fails if the input sequences hav…
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Currently, search has a button for "Custom" but it does not clarify what type of custom files it accepts.
Since search allows for custom motifs and for custom structures to be included it would ma…
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What happens when a negative precision factor is given to the alignment search endpoint currently?
Expected behavior: Throws an error indicating that the precision factor must be positive.
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Copied from UserVoice:
_Hello,_
_I am currently testing the Advanced Search feature in Shopware 6 and have encountered an issue that I believe could be improved._
_When indexing various properties…
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Throw exception for residue not found in motif maker test
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Frequency: Every time
Action:
1: Launch the app and login with a valid credential.
2: Tap on "START" and navigate to "Camera Roll>>Motif" screen.
3: Tap on "Search" field(Keypad will be displaye…
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Frequency: Every times
Action:
1. Launch Lomotif
2. Click on Start
3. Select Motif tab on Albums screen
4. Click on Search bar
5. Search for "Love" word
6. Check searched motifs as result and also ch…