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Hello,
I have tried to run the brain models with Python 3.9, 3.10, and 3.11 under "Multiscale_Brain_Structure_Simulation" models like "HumanBrain", "MouseBrain", and "" and am getting errors like t…
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We want to see an allosteric conformational change in our complex for a 10 to 15 millisecond time scale frame. We have plans to make the system hybrid. Water and membrane will have a coarse grain, pr…
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Hello,
From the main github pages, I was wondering if you have any papers on these?
Papers | Codes | Publisher
-- | -- | --
Corticothalamic minicolumn | https://github.com/BrainCog-X/B…
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Does anyone have an idea on how one can run a quasi-static multiscale simulation? Or even better a hybrid dynamic -quasistatic simulation with quasistatic simulations in some subnetworks
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Aspect | Detail
--------------|--------------
Summary | Creation the tools of co-simulation Nest and TVB
Task Area | Functionality
Assignee | @lionelkusch , @sdiazpier, @maed…
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Performing simulations recently on Marconi, I noticed an unusual numerical instability. With commit 8eba66af5ea631d6ee9be4ec13d067afdf04ce47 (close enough to the master of stella to be of interest, I …
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I've been exploring multi-resolution methods (such as ONIOM and QM/MM) to couple atomic-level details to large biomolecular constructs.
What I'd like to explore is how to unite these models, from bot…
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Hello all,
When i run the example "pruning" to generate bipartite graphs, there is an error:
![image](https://github.com/user-attachments/assets/6a2ca97c-de2e-40e2-b7ea-0a3bcb9d29bc)
So i change …
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***I am moving this issue over verbatim from the Fortran svFSI repository***
I am developing a model for the perfusion of blood within a tissue volume. The model is a single-compartment Darcy model…
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EBRAINS technical coordination expects a constantly updated '2 pager' for all EBRAINS components.
The co-simulation 2-pager is located:
https://wiki.ebrains.eu/bin/view/Collabs/technical-coordinati…