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How to install and load mzkit or mzkit-hpc in R? I see require(mzkit) in your zzz.R, but I am unable to install mzkit using BiocManager or devtools::install_github.
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I am using mzkit-20240209 version, it seems that mzML can batch import, but can not batch run peak extraction? It can only be done by right-clicking deconvolution one file at a time, but this step app…
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I was trying to use the MS-imaging Viewer to open the imzml data which can be opened in SCILS.
At the beginning,"open imzml" and "loading data" displayed normally,but after that,nothing happended.
T…
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I would like to ask if there are existing tools that use this principle for peak lifting, if not, do you plan to build new upstream analysis tools based on this?
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Currently, there are a series of maven-associated tests in https://github.com/calico/mass_spec/tree/master/lib/cpp/mzkit/libmzkit
This is OK, but given that the majority of the code is `maven_core`…
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**Describe the solution you'd like**
Some suggestions about this handsome repository:
I found that a nuget package published about [sciBASIC#](https://github.com/xieguigang/sciBASIC).Why not using n…
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`groupOverlap` is used as one of the fields to determine peak quality. When it is not set, it is set to a value of 0, which is a very low quality score.
It would probably be a good idea to develop …
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Similar to one of the bugs last year. Mzkitchen data doesn't pick up the real peak, but only reporting noises
These are the two suggested peaks from mzkitchen:
![image](https://user-images.githubu…
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After running MzKit to generate a rumDB, I matched peaks with Maven, however, ID labeled on RumDB didn't show up as the suggested compound in compound search of Maven. I increased the precursor ppm to…