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Hi,
Our HPC uses PBSpro. Does `make_lastz_chains` support PBSpro?
Best wishes,
MIchal
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Hi
We are trying to setup the cromwell + wdl for genomic analyses at the [National Computational Infrastructure HPC facility](https://nci.org.au/systems-services/peak-system/raijin/) in Australia. Th…
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Hi,
sorry, pbspro issues again ;) The following line should be added to the wrapper:
# PBS -V
This will automatically export environment variables. Otherwise, one would have to always specify full p…
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Hi folks,
Just curious to know if your team expects to be adding other WLM integration options to the project. Our site uses PBSPro and a `--with-pbspro=PATH` in the configure options would be han…
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We got a [bug report in discourse](https://discourse.osc.edu/t/bug-updated-ondemand-interactive-apps-spill-over-to-other-interactive-apps-on-submission/760) with some strange behaviour with PBS.
What…
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### Steps to reproduce the issue
```console
$ spack install openmpi
...
```
```
packages.yaml:
packages:
mpi:
require: 'openmpi@4.1.5'
openmpi:
variants: schedulers=tm
pb…
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We are using PBSPro on our cluster and typically to specify ressource allocation we use the `select=N:ncpus:M:mem=X` format.
However currently there is only the `total_cpu_count` parameter. If I set…
timeu updated
4 years ago
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When calling expect() with MATCH_RE in the attribute list (e.g - self.server.expect(NODE, {'state': (MATCH_RE, 'down')}, op=NE, id=self.shortname)), MATCH_RE seems to override op=NE:
_2019-03-08 0…
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Hi Marek,
Thank you for sharing your wonderful pipeline! MINTIE is working very well in local mode submitted to our queue through an interactive job.
We have had problems with the cluster imple…
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I have recently run Bpipe to submit jobs to PBSpro. And getting complaint about high frequency of polling to the cluster. Are there any options to reduce it and how these options are understood and sp…