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```
Investigate ability of PRIDE to handle QCML as part
of ProteomeXchange submissions.
Which would be feasible integrations?
```
Original issue reported on code.google.com by `mathias....@gmail.co…
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Here a file with all the USIs corresponding to the reanalysis performed using quantms and DIANN workflow.
[PXD019909.1-USI.txt.zip](https://github.com/HUPO-PSI/usi/files/14040631/PXD019909.1-USI.t…
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For example, [Label-free Analysis of CD8+ T Cell Subset Proteomes Supports a Progressive Differentiation Model of Human-Virus-Specific T Cells](
https://www.ncbi.nlm.nih.gov/pubmed/28467900) (2017) p…
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```
Hi,
I am trying to convert X!Tandem results to PRIDE-XML results.
Here is the command I am using:
java -cp ".:/home/dfermin/proteomeXchange/pride-converter/lib" -Xms2g -Xmx24g
-jar
/home/dfer…
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I want to konw our software MG-GF+ would generate files for complement submission in ProteomeXchange?
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On Wed, Aug 30, 2017 at 11:10 PM, Nuno Bandeira wrote:
Hi Raja,
It was great to touch base today - I'm attaching the [Nature Biotech paper](https://www.ncbi.nlm.nih.gov/pubmed/27504778) I menti…
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See https://github.com/ihmwg/IHMCIF/pull/104 for details
- [x] Add `_struct.pdbx_structure_determination_methodology` and the corresponding vocab table
- [x] Add `ihm_ordered_model`
- [x] Add …
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**Describe the bug**
Running any MaxDIA pipeline using .wiff as input fails on Feature detection step:
```
Configuring
Assemble run info
Finish run info
Testing fasta files
Preparing searches
…
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I ran the following code using rpx for Bioc 3.16 running R 4.2.2 on an Intel Mac running OS 12.6. Errors are shown within the code. Note that I had no trouble loading the example data set. Other data …
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Future Use cases:
- [ ] Fin the database or repository that fits my need. For example, I have a dataset and I want to know
is the best option for my needs. For example which of the ProteomeXchan…