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The complex denoising OpenNeuro test dataset ([`ds004666`](https://openneuro.org/datasets/ds004666)) contains a session with 0.9 mm3 voxels and 199 directions. I tried processing the job with a job me…
tsalo updated
3 months ago
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请问论文中表格里的实验结果是在66个线上评估的测试集上的结果,还是在您划分的val集上的测试的结果。
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作者大大你好,
文章当中提到的Since the ground-truth of the validation set is not publicly available, the performance is validated via the official server. 我想请问在cbica平台上提交是具体如何进行的,我按照提示上所写的ID.nii.gz格式进行上传,返回的csv结果是…
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### What happened?
Running Nibabies on a multi-echo infant dataset led to the error `name 'resource_filename' is not defined`.
### What command did you use?
```shell
singularity run --home $HOME --…
tsalo updated
8 months ago
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https://www.med.upenn.edu/cbica/captk/
Spryidon Bakas can help provide information
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### What happened?
The `ds_report_t2scomp` and `ds_report_t2star_hist` nodes of `init_bold_wf` fail due to a missing `source_file` when I process multi-echo data with `--level resampling`.
I th…
tsalo updated
7 months ago
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Apparently, someone has already done this on a patched version of dcmqi: https://github.com/CBICA/dcmqi/blob/master/azure-pipelines.yml. Adding this as a bookmark for the future.
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### What happened?
The transform file `_from-scanner_to-boldref_mode-image_xfm.txt` has the motion correction transform for each volume. However, the transform `_from-scanner_to-T1w_mode-image_xfm.tx…
tsalo updated
11 months ago
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Is there a model zoo? I.e. pretrained models for datasets such as ABIDE? Thanks!
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**Describe the bug**
MONAI Label server is giving the following error when "brats_mri_segmentation_v0.2.1" is used for brain tumor segmentation.
**RuntimeError: Given groups=1, weight of size [16,…