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On Tuesday we discussed decreasing bias by being less precise. With Kmeans, we could increase K. Are there other ways or examples of decreasing bias outside of changing the model being used?
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```
The is a problem in the ODF calculation. ODF seem to be flip, but it's not a
simple axe flip. Maybe a wrong matrix manipulation.
```
Original issue reported on code.google.com by `Girard.G...@gm…
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We need two pipelines: one with FSL eddy and one with FLIRT. FSL eddy is preferred so the CLI should determine whether the input dataset meets the requirements for eddy. There are two possible ways to…
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### Title
The BIDS connectivity project - current state and next steps of the BEPs
### Short description and the goals for the OHBM BrainHack
Besides `BIDS`' success, expansion, and description of …
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quick-and-dirty documentation:
First, make sure to select the correct interpreter: SHIFT+CMD+P, then select SCT's conda:
![image](https://github.com/spinalcordtoolbox/spinalcordtoolbox/assets/24…
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Hello Developers! I am running QC pipeline for my DTI files. However, I am facing issues with the execution. I have tried updating my packages to latest versions but still no help with the issue.
…
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### Description
Design a Arcana analysis class that implements structural MRI preprocessing and analysis to be used stand-alone or as inputs to other pipelines (i.e dMRI, fMRI, etc.)
### Benefit H…
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Here is some feedback on 64 gradient directions (b=1000mm/s^2) and 1 b0 data I have without the opposite phase encoding direction.
See below the gm_norm, wm_norm, and csf_norm data.
![Screen Shot…
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The b0-normalisation with `dwinormalise` in
https://github.com/sotnir/NENAH-BIDS/blob/dc115bbff5fad52aa14938a0f693ae84dda8104f/dMRI/preprocess_QC.sh#L268-L291
should be replaced with a `mtnormalise…
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1) none (so just using 3dwarp to put the anat in the functional's orientation and resolution, which can plausibly mean no changes at all) which can be useful for functional images with no spatial dist…