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Hi all
I did louvain based clustering on my scRNA seq dataset and I want to see the average expression of a gene across each cluster.
For example, I have a vector of gene names
`oxi_phos1
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Here is a reproducible example.
```{r}
library(tidyverse)
library(rmarkdown)
library(knitr)
library(kableExtra)
dt %
column_spec(1, bold = T) %>%
kable_as_image()
```
This is XeTeX, …
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I am attempting to use a Poisson model with stratum‐specific fixed intercepts as an equivalent for conditional logistic regression with mixed-effects to analyze resource selection for wildlife via a s…
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Is there any scope/appetite for supporting multiple `.SD` and `.SDcols`?
**Motivation:** I frequently encounter situations where I need to perform different aggregation tasks on distinct column gro…
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Hello there,
I am analyzing single cell ATAC data obtained from PBMCs. For the cellranger analysis I mapped my data against a custom genome (Human and virus mixed genome). For the analysis, I was fo…
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It would be nice to be able to return a data.table on the fly _without_ the key.
This would be useful for things like regressions where you might want to keep a key, but you don't want to include i…
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I have been stuck for a while with an installation error for S4Vectors.
I am not sure what caused the issue. After reading online, my hypothesis so far is that the latest versions of R treat compi…
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ggplot in R removes unused categorical variables when scales="free_x" is used:
```
library(ggplot2)
plot_data
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Hello, I have been trying to load a 10X Visium CytAssist counts matrix into a Spatial Seurat object but I keep running into an issue with having the data load. When I submit the data with
```
data_…
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Hi!
Thank you for the outstanding work on ggpmisc!
Over the past few days, I've been attempting, albeit unsuccessfully, to implement ggpmisc's stat_ma_eq and stat_ma_line within the upper plots …