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Following from the discussion in #716, it seems like a lot of the confusion surrounding missing data is due to simplify not having quite the right semantics for the forward simulation case. For forwar…
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my mysql env is:
```
[root][db1]> select @@version;
+-----------+
| @@version |
+-----------+
| 8.0.11 |
+-----------+
1 row in set (0.00 sec)
```
my runtime env was under intellij idea…
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## Have you checked borgbackup docs, FAQ, and open Github issues?
Yes.
## Is this a BUG / ISSUE report or a QUESTION?
Issue.
## System information. For client/server mode post info for bot…
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I'm converting AncestryDNA zip files to vcf and noticing that 2vcf has removed some of my markers in the output file.
Many of the AncestryDNA files have this description:
`#AncestryDNA raw data …
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Steps to reproduce
Import VM into VAPcenter VMware and Setup
Setup an Fileserver (windows) with 1 Million Files
Konfig Nextcloud to use External CIFS Shares from Windows
Import L…
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It would be very nice with a plot simillar to that produced by karyo_haploid but with with different colors or shading to indicate no IBD, maternal IBD, paternal IBD or paternal and maternal IBD.
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Hi,
I get this error
`ERROR: string index out of range`
when using the associate command
`vtools associate rare_nonsyn_vars PHENOTYPE --covariate SEX AGE -m "SKAT disease --p_method opt…
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plot_ibd1 fails, apparently because there are no ibd segments
``` r
library(ibdsim2, quietly = TRUE)
x = halfCousinPed(10)
s = ibdsim(x, sims = 1, verbose = FALSE)
plot_ibd1(s)
#> Error in seq…
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The below tells me that founder inbreeding is ignored by ibdsim2
and perhaps it should, but could notify user:
``` r
library(pedtools)
library(ibdsim2)
cou = doubleCousins(0,0) #remove 's'?
f…
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After performing an update, the Web interface no longer works. On the login page, you are getting this:
```
MySQL Fehler: PDOException: SQLSTATE[HY000]: General error: 1033 Incorrect information i…