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@zkamvar has already written a notebook for numerical simulation of [Makinde (2007)](https://www.sciencedirect.com/science/article/pii/S0096300306007715). Might be fun to try to implement the polynomi…
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### Description
In some cases (see e.g. #7734) derivatives are involved in nonlinear strong components. If not solved with the appropriate precision, they may fool the ODE solvers's error control m…
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I am following the example `dataformat-numerical.ipynb` to convert the output of an ocean parcels simulation to a ragged array and save to a NetCDF file but I do not understand how the time variable i…
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According to the manual, the external fields applied to the grid can be seen in the diagnostics that output the fields on the grid. I performed a boosted frame simulation with sinusoidal B fields in t…
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Dear developers,
there seems to be an issue with restarting a LAMMPS simulation that uses both PLUMED and the SHAKE algorithm.
When I try to restart a biased simulation from a LAMMPS restart file…
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Dear authors,
Hereby an issue to track the main point raised in my review of the work you have submitted to JOSS. See the review thread [here](https://github.com/openjournals/joss-reviews/issues/6…
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hello,
I am new to Multi2sim (5.0)(Ubuntu 15.10).
I want to execute a simple example of multi2sim. I followed the instruction of Getting Started in m2s-guide-4.2.pdf (which is newest existed version…
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What has been done:
- **Markov Chain:**
- _Latex_:
- Fixed Minor Details Discussed
- Tikz Markov Model
- Steady State Expressions in terms of π
- Started writting down …
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Models such as:
- [ ] PSS2A
- [x] PSS2B
- [ ] WT4E
- [x] EXST1
- [ ] STABNI
- [ ] ESAC2A
- [ ] GGOV1
- [ ] GGOVDU1
are not working in OpenModelica or struggle numerically during simula…
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As discussed in https://github.com/CDCgov/Rt-without-renewal/pull/10 we could use numerical integration to find double censored PDFs rather than using simulation or in the stan code approximating usin…